andrewjpage's repositories
gff3toembl
Convert a GFF3 file to a format acceptable for submission to EMBL
Language:PythonGPL-3.0000
active_subspaces
Python Active-subspaces Utility Library
Language:Jupyter NotebookNOASSERTION000
assembly-stats
Get assembly statistics from FASTA and FASTQ files
Language:C++GPL-3.0000
Language:PerlGPL-3.0000
Language:PerlGPL-3.0000
Language:PerlNOASSERTION000
Language:Perl000
Farm_blast
Python3 module to run blast+ or blastall in parallel on an LSF compute farm
Language:PythonGPL-3.0000
fastqcheck
Generate statistics on and validate fastq files
homebrew-bioinformatics-linux
:beer: :penguin: Homebrew formulae for bioinformatics software only available for Linux
homebrew-python
:snake: Python formulae for Homebrew
Language:Ruby000
kraken
Kraken taxonomic sequence classification system
Language:C++GPL-3.0000
linuxbrew
:penguin: A fork of Homebrew for Linux
Language:RubyNOASSERTION000
Language:CNOASSERTION000
pathogens-vm
To build a virtual machine with some Sanger pathogens software installed
Language:ShellGPL-3.0000
Language:JavaNOASSERTION000
PySnpSites
Experiments optimising python (with Cython)
Language:Python000
Language:JavaGPL-3.0000
GPL-3.0000
Language:PythonNOASSERTION000
Language:PythonGPL-3.0000
Language:PerlGPL-3.0000