This is an attempt of an awesome list for Nim for Bioinformatics
| Library | Description | Comment | Tools using this library |
|---|---|---|---|
| SciNim/bio (docs) | A library to work with biological sequences | Part of SciNim | |
| SciNim/bionim | A collection of useful algorithms and data structures for bioinformatics | Part of SciNim (forked from Unaimend/bionim) | |
| Unaimend/biotools | functions and command-line utilities for working with biological data | ||
| brentp/d4-nim | nim-lang wrapper for the d4-format | ||
| brentp/hts-nim (docs) | nim wrapper for htslib for parsing genomics data files | ||
| brentp/nim-kmer | DNA kmer operations for nim | ||
| kerrycobb/PhylogeNi (docs) | A Nim library for phylogenetic trees | ||
| kerrycobb/BioSeq (docs) | Nim package for working with biological sequence data such as DNA, RNA, and amino acids. | ||
| bio-nim/nim-kmers | Library for bioinformatics (kmers, etc.) written in Nim | ||
| bio-nim/nim-edlib | Nim wrapper for edlib | See also sstadick/nimedlib | |
| jhbadger/nimbioseq | Nim Library for sequence (protein/nucleotide) bioinformatics | ||
| telatin/seqfu2 | Provides short and useful functions and command-line utilities for working with biological data | ||
| bpr/bio | Bioinformatics library for Nim | Static since 8 years. No docs | |
| mjendrusch/nimna | DNA/RNA folding in Nim (bindings to ViennaRNA) | Static since 6 years | |
| sstadick/nimedlib | Nim wrapper for the Edlib library | See also bio-nim/nim-edlib | |
| andreas-wilm/nim-gmlparser | Experimental code for parsing GML files with Nim | Wraps around the original GML C library from the Faculty of Computer Science and Mathematics of the University of Passau | |
| andreas-wilm/nimreadfq | A wrapper to Heng Li's kseq/readfq, an efficient FastQ/Fasta parser | Superseded by Heng Li's own implementation |
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