Anders Goncalves da Silva's repositories
kraken-trawl
A tool to help create custom `kraken` databases
beast2_constsites
Update your BEAST2 XML to account for constant sites
andersgs.github.io
My page with blogdown
dnabarcodereader
Automate DNA barcode assembly, quality control, and query
measuringNaturalSelection
Code used in the chapter Measuring Natural Selection
meningotype
In silico serotyping, finetyping and Bexsero antigen sequence typing of Neisseria meningitidis
transtreesampler
Sample transmission trees using Outbreaker2
DNABarcodes
Automated DNA barcode assembly, quality control, and annotation
mask_plasmid
Generate a quick BED file of a Genbank file to feed into Snippy4 --mask
mig-converter
Convert Migrate-N output from M to Nm
nullarbor_translate
Translate the Nullarbor output into any format using Jinja2 templates
pop_gen_scripts
A repo for some of my collection of population genetic scripts
py_fasta_validator
A Python extension of the fasta validator
slim-containers
Slimmer container for bioinformatics using conda
thedaggiebinfie
My website