amyxlu

CPCProt

Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.

evo

Mono-repo for protein utilities.

amyxlu.github.io

Academic homepage.

biopandas

Working with molecular structures in pandas DataFrames

chatsense

Android messaging app that performs audial emotion analysis.

Create-LMDB-from-Numpy

design-baselines

Baselines for Model-Based Optimization

design-bench

Benchmarks for Model-Based Optimization

dotfiles

openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

paired_cell_inpainting

Self-supervised learning for microscopy images

ProteinMPNN

Code for the ProteinMPNN paper

transformers

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.