alistairewj

sepsis3-mimic

Evaluation of the Sepsis-3 guidelines in MIMIC-III

mimic-iv-aline-study

Replication of the arterial line study in MIMIC-IV

tree-prediction-tutorial

Tutorial on prediction with medical data using tree based models

icu-model-transfer

Evaluating methods to improve model transfer for intensive care unit models

bert-deid

deidentify patient notes using pre-trained BERT

pyroc

Calculate area under the ROC and p-values when comparing predictions

cvpr-2021-cxr-tutorial

Tutorial introducing chest x-rays and challenges in building deep learning models with them

mimic-analysis-template

A template for conducting an analysis in the MIMIC clinical databases

NeuroKit.py

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).

lecture-intro-to-nlp

oasis

Code for calculating the Oxford Acute Severity of Illness Score

process-biases-in-mimic

Evaluating biases in the healthcare process which impact results

alistairewj.github.io

Personal website built using Hugo and based off the hugo-academic theme

got-predictions

Making predictions about season 6 of Game of Thrones

aki-progression-prediction

Predict progression of AKI from stage 1 to stage 3 in hospitalized patients

bert-deid-models

Trained models for use with bert-deid package

cvpr2021tutorial

When Image Analysis Meets Natural Language Processing: A Case Study in Radiology

deduplicate-text-datasets

label-studio

Label Studio is a multi-type data labeling and annotation tool with standardized output format

lbulgarelli.github.io

NegBio

High-performance tool for negation and uncertainty detection in radiology reports

PIC

PIC (Pediatric Intensive Care) database

SEPERA

Code repository for the paper "Development, multi-institutional validation, and algorithmic audit of SEPERA - An artificial intelligence-based Side-specific Extra-Prostatic Extension Risk Assessment tool for patients undergoing radical prostatectomy".

transformers

🤗Transformers: State-of-the-art Natural Language Processing for Pytorch and TensorFlow 2.0.

12-lead-ecg-classifier

ECG classification using deep learning

b2aiprep

bert_score

BERT score for text generation

bridge2ai-redcap

Bridge2AI Voice | REDCap

glowyr

glowyr.ca website

pyedflib

pyedflib is a python library to read/write EDF+/BDF+ files based on EDFlib.