alienzj

autossh-tunnel-windows

A quick repo documenting my configuration for setting up AutoSSH on Windows for tunnelling.

bioawk

BWK awk modified for biological data

fontconfig-zh-cn

iRep

scripts for estimating bacteria replication rates based on population genome copy number variation

LTEE-metagenomic

Time-resolved metagenomic sequencing of Lenski's long-term evolution experiment with Escherichia coli

metabgc-snakemake

metassemble

Scripts to run several metagenomics assembly programs

microbiome_evolution

Scripts for analyzing evolutionary dynamics in large cohorts of human gut metagenomes