Jie Zhu's repositories
alienzj.github.io
ZJ Org Blog
BioArchlinux-Packages
Aim to be the bioinformatics repository with more and newer packages
cloud-atlas
云计算指南
deep-learning-with-python-notebooks
Jupyter notebooks for the code samples of the book "Deep Learning with Python"
diced
A Rust reimplementation of the MinCED method for identifying CRISPRs in full or assembled genomes.
home-manager
Manage a user environment using Nix [maintainer=@rycee]
iskylims
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
jupyenvrc
Jupyenv for reproducible computing
microshades
This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions for applying these colors to microbiome data.
nix-config-ryan4yin
❄️ my nix config for both desktops(NixOS+macOS) and homelab servers(NixOS).
nixos-router
A somewhat generic nixos module for a router
phylophlan
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
raxml-ng
RAxML Next Generation: faster, easier-to-use and more flexible
scfa_predictions
Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut
snakefmt
The uncompromising Snakemake code formatter
winapps2
The winapps main project, forked from https://github.com/Fmstrat/winapps/