aicbu

Diyanath Ranasinghe's repositories

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A Meta-barcoding pipeline for analysing ONT data in QIIME2 framework

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Repository for Allergy Immunology and Cell Biology Unit (AICBU), University of Sri Jayewardenepura, Sri Lanka.

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Nextstrain build configuration for maintaining https://nextstrain.org/community/aicbu/ncov/srilanka

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Python Course for DiMeN CDT April 2023

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Simple python script to convert Fasta headers to GISAID style

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JSON for Sri Lankan Nextstrain build managed by USJP

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Quick lookup codes for bioinformatics

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Genomic and epidemiological analysis of SARS-CoV-2 viruses in Sri Lanka

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An R package for Standardized Summary, Annotation, Comparison, and Visualization of CNV, CNVR and ROH

GPL-3.0000

Nextstrain build for novel coronavirus SARS-CoV-2

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A tool to quantify sub-genomic RNA (sgRNA) expression in SARS-CoV-2 artic network amplicon nanopore sequencing data.

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