ahwillia

conference-website-template

Simple HTML/CSS website template for an academic/tech conference

netrep

Some methods for comparing network representations in deep learning and neuroscience.

repsim

PyTorch-based library for various kinds of representational-similarity analysis

stochman

Algorithms for computations on random manifolds made easier

braintime

Brain Time Toolbox: Warp electrophysiological data from clock time to brain time and analyze the dynamic neural patterns of cognitive processes.

figurl

Shareable, interactive scientific figures in the cloud

minian

miniscope analysis pipeline with interactive visualizations

pytorch-minimize

Newton and Quasi-Newton optimization with PyTorch

geotorch

Constrained optimization toolkit for PyTorch

pymc

Bayesian Modeling and Probabilistic Programming in Python

vbgcp

Probabilistic Tensor Decomposition of Neural Population Spiking Activity

pytorch-minimize

Use scipy.optimize.minimize as a PyTorch Optimizer.

mat7.3

Load MATLAB 7.3 .mat files. I.e. load hdf5 into Python datatypes.

adjustText

A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

clusim

An extended package for clustering similarity

AP_histology

Histology processing

cuosqp

Python interface for CUDA implementation of OSQP

rolling-variance

Simple code for efficient calculation of online updates to moving or running variance and mean using Welford's method.

snax

PsychRNN

PPSeq.jl

Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains

Peaks.jl

Find peaks (local extrema) of signals

EnsemblePursuit

py-glm

Generalized Linear Models in Sklearn Style

basis-expansions

Basis expansion transformers in sklearn style.

ssm

Bayesian learning and inference for state space models

repo-remover

A web app that helps you archive and delete old/unused repos, quickly and easily.

nitime

Timeseries analysis for neuroscience data

CMF.jl

Convolutive Matrix Factorization in Julia

datasets

TFDS is a collection of datasets ready to use with TensorFlow, Jax, ...