could not find function "AUCell_run"
Jiayi-Zheng opened this issue · comments
Hello, I was trying AUCell with R and:
> library(AUCell)
> cells_AUC <- AUCell_run(exprMatrix, geneSets, aucMaxRank=nrow(cells_rankings)*0.05)
Error in AUCell_run(exprMatrix, geneSets, aucMaxRank = nrow(cells_rankings) * :
could not find function "AUCell_run"
> ls("package:AUCell")
[1] "AUCell_buildRankings" "AUCell_calcAUC" "AUCell_createViewerApp" "AUCell_exploreThresholds" "AUCell_plotHist"
[6] "AUCell_plotTSNE" "aucellResults" "cbind" "getAssignments" "getAUC"
[11] "getRanking" "getSetNames" "getThresholdSelected" "nGenes" "orderAUC"
[16] "plotEmb_rgb" "plotGeneCount" "plotTsne_cellProps" "rbind" "setGeneSetNames"
[21] "subsetGeneSets" "updateAucellResults"
The same problem here. Do you have a solution?
I updated to 1.22 and it works