Adam Sardar (adamsardar)

adamsardar

Geek Repo

Location:Bristol, UK

Twitter:@adamsardaraskar

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Scriven

Adam Sardar's repositories

stoneTrees

Integrating 'omics data with biological networks by solving Steiner Tree problems

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Domain-Stats

A set of scripts to help me extract domain summary information. Kinda sloppy, but an eye to improving them

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HGT

Scripts to study HGT using the SUPERFAMILY database

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Magic-Cardshuffling

Working out how best to shuffle a deck of cards

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OSS_workshop_bristol_data_week_23

Materials for the workshop 'LV=GI Workshop on Open Source Software', part of Bristol Data Week 2023

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perl-libs-custom

A collection of custom perl modules for general use in code

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Plot-Tools

Simple scripts to allow for easy use of Matplotlib through Python

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TraP

Transcribed Proteome Annotation

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TreeFuncs

A bunch of useful scripts for dealing with trees

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currentFlowCentrality

A generalisation of network closeness and betweeness to all paths rather than just geodesics

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metaDEGth

metaDEGth: meta-analysis of Differentially Expressed Genes using parametric, empirically-derived P-value distributions

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RcppORtools

Rcpp integration for google's ORtools

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adamsardar.github.io

Bits and pieces of research

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broom

Convert statistical analysis objects from R into tidy format

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BZINB

Bivariate Zero-Inflated Negative Binomial Model Estimation

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ChEMBLstats

Data processioning relating to Enhancing Chemogenomics with Predictive Pharmacology paper

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CPLEX.jl

Julia interface for the CPLEX optimization software

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docker-images

Official source for Docker configurations, images, and examples of Dockerfiles for Oracle products and projects

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FASTXMusselle

Scripts to help with fasta/fastq manipulation

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gravityModelsOfTrade

A play with some web scraping in R and an excuse to explore gravity trade models

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learnRcpp

A repo of me trying to learn about Rcpp.

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magma

R Package for Matrix Algebra on GPU and Multicore Architectures

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matrix-toolkits-java

Java linear algebra library powered by BLAS and LAPACK

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paper_openapc

article repo for PeerJ contribution

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RcppRDKit

(Incomplete) R bindings to the C++ API of RDkit

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rdkit

The official sources for the RDKit library

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statsmodels

Statsmodels: statistical modeling and econometrics in Python (with a devcontainer)

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tidyr

Tidy Messy Data

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tubular

Python package implementing transformers for pre processing steps for machine learning.

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