Abyzov lab (abyzovlab)

Abyzov lab

abyzovlab

Geek Repo

Software packages developed in Abyzov's lab

Location:Rochester, MN

Home Page:http://abyzovlab.org

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Abyzov lab's repositories

CNVnator

a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads

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CNVpytor

a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads

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AGE

a tools that implements an algorithm for optimal alignment of sequences with structural variants (SVs)

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vcf2diploid

personal genome constructor

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All2

A tool for filtering variants from all2all comparison of multiple clones or single cells

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Leucippus

A tool for confirmation of mosaic variants from targeted sequencing

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SCellector

Tool to conduct QC of single cell amplification

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Belka

a software that implements RigidFinder, a method to detect protein rigid blocks from two different conformations.

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CNVpytorVCF

CNVpytor plugin for JBrowse

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Web-page

Web content of the page describing the lab

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