Alec Chapman's repositories
VA_COVID-19_NLP_BSV
An NLP pipeline for COVID-19 surveillance used in the Department of Veterans Affairs Biosurveillance.
info_3700_spring_2021
Class repository for UVU's INFO-3700 Health Informatics Fundamentals
medspacy_pneumonia
Flexible NLP pipeline for identifying pneumonia in across clinical settings and institutions.
medspacy_template
Template for designing rule-based clinical NLP systems with medspaCy
PHS_Data_Science_2022
Repository for University of Utah's Department of Population Health Sciences 2022 Data Science Workshop
info_3700_fall_2019
Repository for UVU INFO 3700, Fall 2019
alec.chapman.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
fiiesct_nlp
Natural Language Processing system for extracting food insecurity from clinical notes.
HMIS-Mapping
Code for mapping HMIS data elements
ideas_lime_tutorial
Hands-On tutorial of LIME for IDEAS NLP Journal Club
Linear_Algebra_With_Python
Lecture Notes for Linear Algebra Featuring Python
medspacy_pna_michigan
Temporary version of medspaCy pneumonia with modified medspaCy requirements included.
medspacy_ssi
Refactoring of old SSI pyConText project using medspaCy
R_Bootcamp_2021
University of Utah Department of Population Health Research R Bootcamp course materials.
rehoused_longitudinal
Code for performing longitudinal analysis of housing instability using ReHouSED NLP
text-sectionizer
Adaptation of medspaCy Sectionizer for raw text