abchapman93

VA_COVID-19_NLP_BSV

An NLP pipeline for COVID-19 surveillance used in the Department of Veterans Affairs Biosurveillance.

ReHouSED

NLP system for identifying patient housing status in Veteran Affairs

info_3700_spring_2021

Class repository for UVU's INFO-3700 Health Informatics Fundamentals

medspacy_pneumonia

Flexible NLP pipeline for identifying pneumonia in across clinical settings and institutions.

medspacy_template

Template for designing rule-based clinical NLP systems with medspaCy

info_3700_fall_2019

Repository for UVU INFO 3700, Fall 2019

Melbourne_COMP90089_NLP

PHS_Data_Science_2022

Repository for University of Utah's Department of Population Health Sciences 2022 Data Science Workshop

PHS_Data_Science_2022_instructor

r-mimic

abchapman93.github.io

alec.chapman.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

Applied_Causal_Inference

delphi-nlp-2024-dev

DELPHI_Intro_to_NLP_Spring_2024

delphi_sql_2023

fiiesct_nlp

Natural Language Processing system for extracting food insecurity from clinical notes.

HMIS-Mapping

Code for mapping HMIS data elements

ideas_lime_tutorial

Hands-On tutorial of LIME for IDEAS NLP Journal Club

iiw_example_01102024

Linear_Algebra_With_Python

Lecture Notes for Linear Algebra Featuring Python

MedInfo-2023-Pneumonia-Linguistic-Analysis

medspacy_pna_michigan

Temporary version of medspaCy pneumonia with modified medspaCy requirements included.

medspacy_ssi

Refactoring of old SSI pyConText project using medspaCy

moore_pna_michigan_demo

NEXUS_Methods_Lab_NLP_2024

PHS-Secondary-Data-Analysis-Spring-2024

R_Bootcamp_2021

University of Utah Department of Population Health Research R Bootcamp course materials.

rehoused_longitudinal

Code for performing longitudinal analysis of housing instability using ReHouSED NLP

text-sectionizer

Adaptation of medspaCy Sectionizer for raw text