Bioinformatics Group @ SMU

Bioinformatics Group @ SMU's repositories

treedata-book

:books: a complete reference book for treeio, tidytree and ggtree packages

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plotbb

:paintbrush: Grammar of Graphics for base plot

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treedataverse

Meta package for processing and visualizing tree with data

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plotting-tree-with-data-using-ggtreeExtra

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survival-guide

YuLab的生存秘笈

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wget

download files in R using wget -c

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clusterProfiler-book

a complete reference book for clusterProfiler and its sub-packages

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clusterProfiler.dplyr

dplyr verbs for clusterProfiler outputs

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MicrobiotaProcessWorkshop

The workshop of microbiome datasets analysis using MicrobiotaProcess

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iggtree

interactive tree viewer using ggtree + shiny

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supplemental-clusterProfiler-v4

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supplemental-ggbreak

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BMplot

Base Modification Visualization

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msacolor

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ggmsaBioWorkshop2021

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misc

3 40

lab_dot_files

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ChIPseeker_current_protocols

100

COSemSim

An R package measures semantic similarity value for cell types, genes and proteins

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ggacmap

plotting acmap using ggplot2

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supplemental-ggmsa

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CBNplot

Bayesian network plot for the enrichment analysis results

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mTAS

A snakemake workflow for comprehensive analysis of toxin-antitoxin systems

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pkgdocs

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Supplemental_ggtree_placement

Supplementary code and data

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