YuLab-SMU / biomedical-knowledge-mining-book

:books: Biomedical knowledge mining using GOSemSim and clusterProfiler

https://yulab-smu.top/biomedical-knowledge-mining-book/

YuLab-SMU/biomedical-knowledge-mining-book Issues

Chapter 15 - Seurat option?
Updated 2 months ago
chapter 14: CompareCluster question
Updated 4 months ago
treeplot not working
Updated 4 months ago
enrichkegg函数报错
Updated 6 months ago2
Treeplot() Links Broken
Updated 6 months ago
Example data in 12.2 not loadable
Updated 7 months ago
KEGG enrichment analysis - supported organisms
Closed a year ago2
Error No genes can be mapped while normal enriched on DAVID
Updated a year ago
Cell Marker doc example is broken
Closed 2 years ago6
link expired
Closed a year ago
cannot load Inparanoid8Db database, not a defined class
Closed 2 years ago
enrichplot barplot doesn't work with GSEA enrichment result
Closed 2 years ago1
enrichplot barplot doc with mutate example is broken
Closed 2 years ago2
pairwise_termsim() function cannot be used, others are all fine
Updated 2 years ago1
gseaplot2 color bar meaning unclear
Updated 2 years ago
Multiple errors in pdf generation
Updated 2 years ago
GSEA with phenotype permutation
Updated 2 years ago
Problem with text position in treeplot
Closed 2 years ago2
How to compare two conditions ?
Updated 2 years ago1
clusterprofiler can‘t analysis KEGG BRITE
Updated 2 years ago
How to use clusterProfiler with uniprot ids
Updated 3 years ago1
please help me
Updated 3 years ago2
Gene Set Enrichment Analysis with ClusterProfiler-error
Updated 3 years ago