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TOM YAN (YTLogos)

YTLogos

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Company:Hunan Agricultural University, China

Location:Changsha,China

Home Page:https://taoyan.netlify.app

Twitter:@TaoYANLogos

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TOM YAN's starred repositories

shiny.worker

Intra-session reactivity in Shiny

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countup

⏱️ countup.js R htmlwidget

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flashCard

R package to create a flash Card.

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DLR_ICF

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WWWG2B

All codes associated with WWWG2B project

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Lab_Porcine-Adiposes_paper_codes

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DegCre

DegCre is an R package for the association of DEGs to CREs

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HybridExpress

An R package for comparative transcriptomic analyses of hybrids and their progenitors

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R4BD

R for Big Data (Chinese Version)

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ggcirclepack

Experimental; write up for ggplot2 extenders meet up

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MatrixEQTL

Matrix eQTL: Ultra fast eQTL analysis via large matrix operations

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BnaSNPDB

An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions

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pan-genome-analysis

Processing pipeline for pan-genome visulization and exploration

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sheep-transcriptome-atlas

Comprehensive time-series transcriptome atlas in response to hypoxia

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WFA2-lib

WFA-lib: Wavefront alignment algorithm library v2

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AutoHiC

A novel genome assembly pipeline based on deep learning

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gffread

GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more

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LongTR

Tandem repeat genotyping with long reads

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EnsembleTR

Tools for merging 1000 Genomes calls

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TRcaller

Precise and ultrafast tandem repeat variant detection

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fastq-dl

Download FASTQ files from SRA or ENA repositories.

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TreeProfiler

tree visualization for tree + annotation data

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VCF2PCACluster

A new simple and efficient software to PCA and Cluster For popolation VCF File

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VCF2Dis

VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

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CAP-C-in-Arabidopsis

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vctrs

Generic programming with typed R vectors

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ggmagnify

Create a magnified inset of part of a ggplot object

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ComputationalGenomicsManual

Robs manual for the computational genomics and bioinformatics class.

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login

Shiny Login Module

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Work_flow_of_population_genetics

整理常用的群体遗传学分析流程和脚本

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