Wytamma Wirth's repositories

write-the

AI-powered Documentation and Test Generation Tool

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GISAIDR

Programmatically interact with the GISAID database.

snk

Snakemake workflow management system and CLI generation tool

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beastiary

Real time and remote MCMC trace monitoring with BEASTIARY.

shiny-github

Host Client Side R Shiny Web Apps On Github For Free

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episodic

A complete pipeline for fitting and testing Fixed Local Clock (FLC) molecular clock models for episodic evolution.

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bioconda-recipes

Conda recipes for the bioconda channel.

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compression_benchmark

Benchmarking fastq compression with generic (mature) compression algorithms

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delphy

Fast, scalable, accurate and accessible Bayesian phylogenetics

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pyLangevitour

Python interface for langevitour

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Rosalind

My solutions to the problems found on rosalind.info

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snk-basic-pipeline

An example pipeline that can be installed with snk

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staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

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taxonium

A tool for exploring very large trees in the browser

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wytamma.github.io

https://wytamma.github.io/

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