Reseqtools
A Toolkit for analyzing next-generation DNA Re-Sequencing data
If you have any question ,contact the email: hewm2008@gmail.com / hewm2008@qq.com and also join the QQ Group : 125293663 we will send you the newest Reseqtools (iTools_CodeXX.tar.gz) for you iTools_Code20141231.tar.gz
Function Introduce
iTools has 10 module, every module is the tool for dealing with specific format files. Here we main list 9 the most important modules: 1 Fatools main deals with Fasta format; 2 FqTools main deals with Fastq format; 3 SOAPtools deals with SOAP format which is the result of SOAP[3]. 4 CNSTools deals with cns format which is the result of soapsnp[4]. 5 XamTools deals with sam/bam format which is the result of bwa[5] 6 Gfftools deals with gff format which is the genome annotation file. 7 Formatools is the converter of some Custom format file. 8 Gametools is the package for some classics games 9 Filetools is the tools for file with fixed format 10 Vartools Tools For SOAP Variant 11 Othrtools LDDecay etc >Users also can comprehensive understand of function by get the readme/ppt
==========
重测序分析集成工具包 linux 64位平台 静态编译 chmod 便可以直接运行了 (ReSeqTools/iTools)
即在linux64机上只须 tar -zxvf ReSeqTools_XXX.tar.gz ; cd iTools_Code; chmod 775 iTools ; ./ iTools -h ; 无须重新make
QQ交流群 群名称是Reseqtools QQ群号: 125293663
硕士毕业文章Thesis Disseration Paper (Master):
http://cdmd.cnki.com.cn/Article/CDMD-10561-1013318279.htm
或者进入**知网 http://www.cnki.net/ 搜: 基于重测序数据的群体SNP位点检测及基因型判断
小文章见这儿:
http://www.geneticsmr.com//year2013/vol12-4/pdf/gmr3109.pdf
The paper (title: ReSeqTools: an integrated toolkit for large-scale next-generation sequencing based resequencing analysis )is here:
http://www.geneticsmr.com//year2013/vol12-4/pdf/gmr3109.pdf
Communication & Discussion QQ Group: 125293663
If you have any question ,contact the email: hewm2008@gmail.com/hewm2008@qq.com and also join the QQ Group : 125293663
重测序软件工具包
Fasta Fastq SOAP Sam Bam Gff CNS
Discussing
- email: hewm2008@gmail.com / hewm2008@qq.com
- join the QQ Group : 125293663
######################swimming in the sky and flying in the sea ########################### ##