Wayne Wang's repositories
pacbio-assemble-canu
A single molecule sequence assembler for genomes large and small.
WJT0925.github.io
Ph.D. student from State Key Laboratory of Marine Environmental Science of XMU
3d-dna
3D de novo assembly (3D DNA) pipeline
AiLearning
AiLearning: 机器学习 - MachineLearning - ML、深度学习 - DeepLearning - DL、自然语言处理 NLP
allhic
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
amplicon
Statistics and visualization for amplicon data
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes
Dinoflagellate_Annotation_Workflow
Dinoflagellate Annotation Workflow
DVNP-gene-identify
Pipline for identify DVNP of dinoflagellates
EasyMicrobiome
Scripts and databases for amplicon and metagenome
Flye-2019NATURE
De novo assembler for single molecule sequencing reads using repeat graphs
genomescope
Fast genome analysis from unassembled short reads
Genomic_tools
Genomic related tools
github-slideshow
A robot powered training repository :robot:
HIC-assemble-juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
home
厦门大学攻略大全 Import files, learning materials and useful links of XMU to help XMUers live and learn better.
MEANGS
MitoDNA extending assembler from NGS data
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
NextPolish
Fast and accurately polish the genome generated by long reads.
R_for_Data_Science
Materials for teaching R and tidyverse
Transcriptome_expression_RSEM
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
TransPi
TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
xmu-daily-report
基于Github Actions，无需本地部署，在线fork仓库即可使用的厦大Daily Health Report 健康打卡自动填写脚本