Virtual Fly Brain's repositories
DrosAdultVNSdomains
Drosophila Adult Ventral Nervous System Domains
scxa-to-h5ad
Single Cell Expression Atlas to AnnData format conversion
VfbBridgingRegistrations
Bridging registrations to convert between different Drosophila template brains
Docker-CATMAID
CATMAID server loaded with public EM data
docker-neo4j-knowledgebase
Neo4j instance loaded with VFB KB
Docker-VFB-Neo4j
Basic Neo4J instance setup for VFB
Docker-VFB-Neo4j-ProductionDB
Neo4j server loaded with the VFB Production DB
europmc_crawler
A repository for downloading VFB related papers from the europmc
FlyLightLarvalData
a webserver to host the released raw FlyLight Larval expression data
graph_queries
Development of Neo4j graph queries
nblast-on-the-fly
Containerised NBLAST on-the-fly instance
neuron-to-paper-nlp
A repository for neuron entity linking in the VFB related publications.
rancher-launcher-kvm
An easy way to get a Rancher Kubernetes cluster up and running on KVM/Libvirt
SOLR_sideloader
Pass data directly from PDB to SOLR server
vfb-data-ingest-ui
The UI for uploading image metadata, sitting on top of the vfb-data-ingest-api.
vfb-pipeline-config
Pipeline 2.0 Configuration
vfb-pipeline-dumps
Pipeline that creates dumps from the triplestore for consumption by the downstream services
VFB_connectomics_import
A project to produce RDF/OWL representations of connectomics data for import to the VFB integration layer triple store.
VirtualFlyBrain.github.io
Virtual Fly Brain blog and documentation site