VahidGh

chModeler

A new approach to the old Hodgkin-Huxley model for: Making all ion channel models comparable

chopen

An open source toolbox for ion channel data modeling and analysis

American-Gut

American Gut open-access data and IPython notebooks

ann_course

automatic-control

CElegansNeuroML

NeuroML based C elegans model, contained in a neuroConstruct project, as well as c302

pyannow

VahidGh.github.io

A personal webpage implemented by GitHub pages

ChannelWorm

Tools and curated datasets to build quantitative models of C. elegans ion channels

datasciencecoursera

datasharing

The Leek group guide to data sharing

emp

Code repository of the Earth Microbiome Project.

heroku-jupyter

One-click deployment for jupyter on heroku

IonChannelGenealogyShowcase

Interactions between ICG, NeuroML and OSB

muscle_model

model of c.elegans muscle in NEURON

NeuroMLlite

Work towards creating a common JSON based format for compact network specification

openworm.github.io

OpenWorm Website

org.geppetto

Geppetto - Open Simulation Platform

Plotly-plots

IPython notebooks for Plotly plots

pyNeuroML

A single package in Python unifying scripts and modules for reading, writing, simulating and analysing NeuroML2/LEMS models.

PyOpenWorm

Unified data access library for data about the c. elegans anatomy and model for the OpenWorm project

readme2tex

Renders TeXy Math for Github Readmes