how to pick l in AEH

Question

jon-xu opened this issue 5 years ago · comments

Hi,

I'm wondering how to pick l in AEH from the result of running:
sign_results['l'].value_counts()

Thanks for clarification!

Valentine Svensson · Answer 1 · Wed Dec 11 2019 00:16:15 GMT+0800 (China Standard Time)

You should pick a value that reflects most of the significant genes.

jon-xu · Answer 2 · Wed Dec 11 2019 05:45:30 GMT+0800 (China Standard Time)

so in your example:

1.135190 11
1.907609 4
0.675535 4
3.205604 1
Name: l, dtype: int64

How do we derive ~1.5 and choose 1.8, please?