SuperXiang

EigenFold

EigenFold: Generative Protein Structure Prediction with Diffusion Models

PaddleHelix

Bio-Computing Platform featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

data-preparation

Code used for sourcing and cleaning the BigScience ROOTS corpus

GearNet

GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)

OpenChatKit

AbNumber

Convenience Python APIs for antibody numbering using ANARCI

therML

The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability

OpenComplex

Trainable PyTorch framework for developing protein, RNA and complex models.

abyssal-pytorch

Implementation of Abyssal, a deep neural network trained with a new "mega" dataset to predict the impact of an amino acid variant on protein stability.

BladeDISC

BladeDISC is an end-to-end DynamIc Shape Compiler project for machine learning workloads.

maeparser

maestro file parser

incoder

Generative model for code infilling and synthesis

equifold

Official code repository for EquiFold

rmsd

Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format

HEBO

Bayesian optimisation library developped by Huawei Noah's Ark Lab

GraphPPIS

afm_refiner

chroma-pytorch

Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch

AF_server

foldingdiff

Diffusion models of protein structure; trigonometry and attention are all you need!

ImmuneBuilder

Predict the structure of immune receptor proteins

acdc-nn

alphafoldv2.3.0

Absolut

Unconstrained lattice antibody-antigen bindings generator

gdc

Code accompanying our papers on the "Generative Distributional Control" framework

modelscope

ModelScope is committed to empowering a wide-spectrum of developers to leverage AI models from various domains. (致力于通过开放的社区合作，开源AI模型以及相关创新技术，推动基于模型即服务的生态繁荣发展。)

FvHallucinator

M3ViT

[NeurIPS 2022] “M³ViT: Mixture-of-Experts Vision Transformer for Efficient Multi-task Learning with Model-Accelerator Co-design”, Hanxue Liang*, Zhiwen Fan*, Rishov Sarkar, Ziyu Jiang, Tianlong Chen, Kai Zou, Yu Cheng, Cong Hao, Zhangyang Wang

models

Pre-trained and Reproduced Deep Learning Models （『飞桨』官方模型库，包含多种学术前沿和工业场景验证的深度学习模型）

apollo

An open autonomous driving platform