RamanLab / comm-synleth-virgo

Repository for running FastSL on the community models of Human gut microbes on the Virgo cluster at IIT Madras.

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Virgo

Repository for running FastSL on the community models of Human gut microbes on the Virgo cluster at IIT Madras.

Directory Structure

Original models

This directory contains the original joint models used for lethality analysis.

Final models

This directory contains scripts used to generate the models for various diets and with or without oxygen. Along with this, it contains models which are the to be analysed for synthetic lethals.

find_lethals.m

This is the file that is used to find synthetic lethals inside Final models/models

About

Repository for running FastSL on the community models of Human gut microbes on the Virgo cluster at IIT Madras.


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