RajLabMSSM / echodata

echoverse module: Example data.

https://rajlabmssm.github.io/echodata

RajLabMSSM/echodata Issues

parquet functions causing segfault
Updated 9 months ago2
Get topSS from input GWAS using import_topSNPs
Updated 9 months ago
Allow echolocatoR to map against DR from UKBB 150K
Updated 9 months ago
`ggtree`/`orthogene` failing on Bioc 3.17
Closed 2 years ago1
Switch to using `gh` instead of webscraping
Closed 2 years ago1
`Error: C stack usage 7971808 is too close to the limit`
Closed 2 years ago1
GHA failing on Ubuntu: ` type 'binary' is not supported on this platform`
Closed 2 years ago1
Fix `portal_query`
Closed 2 years ago1
Bug standardise_gene_locus_cols() doesn't inherit column names for SNP CHR
Closed 2 years ago1
`gene_locus_list`: add to echoverse
Closed 2 years ago
Add dataset: Microglia_all_regions_Kunkle_2019_COLOC.snp-level_select.tsv.gz
Closed 2 years ago1
Add function to get coords from rsids
Updated 2 years ago
Bug BP import_topSNPs
Closed 2 years ago2