PacificBiosciences / hifihla

An HLA star-calling tool for PacBio HiFi data types

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HiFiHLA


An HLA star-calling tool for PacBio HiFi data types.

Authors: John Harting, Zev Kronenberg, Daniel Baker, Matt Holt

Availability

install with bioconda

Documentation

  1. Installation
  2. Genes
  3. Usage and Examples
  4. Output
  5. Changelog

References

Barker DJ, Maccari G, Georgiou X, Cooper MA, Flicek P, Robinson J, Marsh SGE. The IPD-IMGT/HLA Database. Nucleic Acids Research (2023) 51:D1053-60.

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An HLA star-calling tool for PacBio HiFi data types

License:BSD 3-Clause Clear License