Oshlack / missMethyl

Bioconductor package for analysis of methylation data from Illumina's Infinium HumanMethylation arrays.

Oshlack/missMethyl Issues

Error in GOmeth function
Updated 3 months ago
What is does DiffLevene represent exactly?
Updated 5 months ago
Support on EPIC v2?
Updated 8 months ago
KEGG Api changes in gometh function cause 400 bad request error
Closed a year ago2
Calling gometh(sig.cpg, collection = 'KEGG') results in error, cannot open URL
Closed a year ago1
Change the genomic.features parameters to custom-made features in goregion function
Updated a year ago2
gometh fails for "KEGG" because .getKEGG uses wrong URL
Closed a year ago8
support other assay type?
Closed a year ago2
RUVfit&RUVad usage in 4 samples data set (2 control/2 treatment)
Closed a year ago2
Calling missMethyl::gometh from within an R package fails unless that package depends on IlluminaHumanMethylation450kanno.ilmn12.hg19
Closed a year ago2
annotation of not cpg-probes
Updated 3 years ago
FDR and P.DE as 0 in the output file for the significant GO pathways
Closed 4 years ago4
gometh is returning DE as floating numbers
Closed 4 years ago
Bug in version 1.21.3
Closed 4 years ago1
goregion() not exported in Namespace
Closed 4 years ago1
A question about `gometh`
Closed 6 years ago2