Oshlack / Corset

Software for clustering de novo assembled transcripts and counting overlapping reads

https://github.com/Oshlack/Corset/wiki

Oshlack/Corset Issues

Segmentation fault
Updated a year ago6
Read counts not being filtered
Updated 2 years ago1
How does Corset deal with chimeric mis-assemblies?
Closed 3 years ago1
Redistribute reads when -l flag is used rather than removing
Closed 5 years ago1
error compiling from source
Closed 5 years ago
stuck after reading bam file?
Closed 5 years ago2
Should check the required memory before starting.
Closed 5 years ago1
Resolve large super clusters
Closed 5 years ago1
Make flag for DTU analysis
Closed 5 years ago1
is corset multe-threaded?
Closed 5 years ago1
Transcripts with no reads aligning are not reported in .corset-reads files
Updated 7 years ago
Corset configuration on ubuntu
Closed 7 years ago5
Intermediate files for restart
Closed 7 years ago1
Multi-threading
Closed 7 years ago1
Way to get a representative transcript for each cluster.
Closed 7 years ago2
Corset results missed!!!
Closed 7 years ago1
Make install overrides corset binary
Closed 9 years ago1
software fails to compile with OSX 10.9 (Mavericks)
Closed 9 years ago1
Bam file reading uses too much memory
Closed 9 years ago1
Allow counting independent of clustering if a cluster file is provided.
Updated 9 years ago