Oshlack / ALLSorts

ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.

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ALLSorts B-ALL subtype classifier

ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier, taking gene expression counts and making predictions across 18 subtypes and 5 meta-subtypes!

Interested? Great! Please refer to the wiki for further information & documentation.

If you have any problems, let us know via issues and we will get back to you promptly.

To see what's next on the agenda, follow the [Projects development].

IMPORTANT: Please ensure your Plotly version is at least version 4. Previous versions could send your resulting visualisations to their Cloud Studio (https://plotly.com/chart-studio/). This was removed as the default behaviour from 4 onwards, in which plotly is exclusively offline - see here (https://medium.com/plotly/plotly-py-4-0-is-here-offline-only-express-first-displayable-anywhere-fc444e5659ee). Though there are some safeguards in place to prevent previous versions (the installation process enforces a particular version and a check during runtime to check version), just double check for your own sanity!

About

ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.

License:MIT License


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