OpenMendel / MendelIHT.jl

Iterative hard thresholding for l0 penalized regression

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Do not perform selection on non-genetic covariates

biona001 opened this issue · comments

Currently, sparsity is enforced on both the genetic and non-genetic covariates. It seems the standard is to not select for non-genetic covariates. So we need one of the following:

  1. Change projection routine to exclude non-genetic covariates from being projected
  2. Add routine to automatically regress out the effect of non-genetic covariates before running IHT

Probably option 1 is better

resolved by #39