Do not perform selection on non-genetic covariates
biona001 opened this issue · comments
Benjamin Chu commented
Currently, sparsity is enforced on both the genetic and non-genetic covariates. It seems the standard is to not select for non-genetic covariates. So we need one of the following:
- Change projection routine to exclude non-genetic covariates from being projected
- Add routine to automatically regress out the effect of non-genetic covariates before running IHT
Probably option 1 is better
Benjamin Chu commented
resolved by #39