OpenMendel / BGEN.jl

OpenMendel/BGEN.jl Issues

TagBot trigger issue
Closed 3 years ago16
convert to called genotypes
Closed a year ago7
minor_allele_dosage!'s outputs oscillates for some variants
Closed a year ago3
Features to add
Updated 2 years ago20
Individual ID extracted from wrong column
Closed 2 years ago2
maf, hwe, info_score, counts! for general cases
Updated 3 years ago
Cannot get ref/alt allele label for haplotype data
Closed 3 years ago2
Always treat REF as `major_allele` and ALT as `minor_allele`
Closed 3 years ago2
Read all ALT allele as 1 and REF allele as 0 in `minor_allele_dosage!`?
Closed 3 years ago1
Feature request: import genotype/haplotypes into numeric matrix
Updated 4 years ago1
Typo for haplotype documentation
Closed 4 years ago2
Importing haplotypes.bgen throws assertion error
Closed 4 years ago1