Mutation Finder
Assembles a genome and finds true mutations among sequencing errors.
Installation and running
- Download and install Bio-Linux, a specialised Ubuntu workstation (Optional)
- Download the Mutation Finder project
- Compile the project: with an IDE or a makefile (TODO)
- Adjust the settings in the settings.ini file to your liking
- Place the settings.ini file and input files into the same folder
- Run the program with: "./MutationFinder"
Folders
| Folder | Contents |
|---|---|
| Docs: | Project documentation |
| Instructions: | Faculty provided instructions |
| MutationFinder: | Project folder |
| Research: | Research notes |
| Results: | Output files, mutation CSV files |
| TestData: | Faculty provided test data |
Authors
University, faculty and course
- University/Faculty: University of Zagreb, Faculty of Electrical Engineering and Computing
- Course: Bioinformatics