MahShaaban

miRCancerdb

A database for microRNA-gene/protein expression correlation in cancer.

target

target: An R Package to Predict Combined Function of Transcription Factors

adiporeg_rna

Collect, process and quality control RNA-sequencing (RNA-Seq) data from differentiating 3T3-L1

cRegulome

An R package to access, manage and visualize regulome (microRNA/transcription factors)-gene correlations in cancer

curatedAdipoChIP

A Curated ChIP-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

ggbio

Grid and ggplot2 based visualization for biological data

adiporeg

Transcription regulation networks in differentiating adipocytes

adiporeg_chip

Collect, process and quality control Chromatin Immunoprecipitation followed by sequencing (ChIP-Seq) data from differentiating 3T3-L1.

BiocWorkshops

:warning: 2018 :warning: Bioconductor Workshops

colocr_app

A shiny app for conducting co-localization analysis.

cRegulomedb

Build the database file for cRegulome package

curatedAdipoArray

A Curated Microarrays Dataset of MDI-induced Differentiated Adipocytes (3T3-L1) Under Genetic and Pharmacological Perturbations

curatedAdipoRNA

A Curated RNA-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)

debCAM

dynamic_analysis

Dynamic analysis of zinc contribution to the structural stability of HDAC6 protein

fars

Coursera R packages capstone

fastqcr

fastqcr: Quality Control of Sequencing Data

MSDR

Mastering software development in R capstone

OutbreakTools

Basic Tools for the Analysis of Disease Outbreaks

QuickCites

This is shiny app maps co-authorship and create a list of publications for authors based on a Google Scholar profile ID.

realamp

ReScience-submission

ReScience submission repository

Rfastqc

An R package to parse and manage text output of the sequencing quality control utility (fastQC)

river_bod

Analysis of public data of river organic pollution in South Korea

rkipcreg

Scripts for reproducing the poster: Co-regulation of RKIP and autophagy genes by VEZF1 and ERCC6 in prostate cancer

roweb2

rOpenSci website

sqlome

Build SQLite tables of microRNAs and Transcription Factors-gene Correlations

TRID

Calculation of TRIple Differentiation