MASI Lab @ Vanderbilt

MASI Lab @ Vanderbilt 's repositories

SLANTbrainSeg

Deep Whole Brain Segmentation Using SLANT Method

Language:PythonNOASSERTION104 13 14

Synb0-DISCO

Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps

Language:Python56 14 63

PreQual

An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images

Language:PythonNOASSERTION39 1 6

pyPheWAS

MASI Lab Implementation of PheWAS in Python

Language:PythonMIT24 7 4

UNesT

The official Pytorch implementation of UNesT

Language:PythonMIT15 3 1

SynBOLD-DisCo

Synthetic BOLD images for distortion correction of fMRI without additional calibration scans

Language:Python13 3 4

S-EFOV

S-EFOV: Thoracic CT-based Body Composition Analysis with Semantically Extended FOV

NOASSERTION11 3 1

cornn_tractography

Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context

Language:Python9 3 1

AtlasToDiffusionReg

singularity to register an atlas to the diffusion space of a subject

Language:Jupyter Notebook1 20

atlas_surface_rendering

Generate a surface to show the deformation from registering subjects to an atlas

Language:Jupyter NotebookNOASSERTION000

Forked to include pre and post processing to enable registration of abdominal T1 and T2 MRI. Both of these modlaities are differently anisotropic. These modifications allow for deeds deformably registered moving image to align with the unaltered anisotropic fixed image.

Language:C++MIT000

MASI Lab @ Vanderbilt

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