LeafLiu's starred repositories
Tvlist-awesome-m3u-m3u8
直播源相关资源汇总 📺 💯 IPTV、M3U —— 勤洗手、戴口罩,祝愿所有人百毒不侵
iptv-m3u-maker
IPTV 国内+国外 电视台直播源m3u文件, 收集&汇总&本地源脚本
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
TBtools-II
GUI/CommandLine Tool Box for biologistists to utilize NGS data.
single-cell-best-practices
https://www.sc-best-practices.org
multiPrime
multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn))
qiwen-file
【奇文网盘】基于Spring Boot 2 + VUE CLI@3框架开发的分布式文件管理系统--后台
open-cravat
A modular annotation tool for genomic variants
cutevariant
A standalone and free application to explore genetics variations from VCF file
AmpliconSuite-pipeline
A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior to running AmpliconArchitect. Previously called PrepareAA.
knotAnnotSV
A simple script to create a customizable html file from an AnnotSV output.
AnnotateVariants
This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions for software installs.
primer-trimming
Fast C code for identifying and removing primers and adapters
Diablo_ACMG
Tool for automated classification of genetic variants according to ACMG criteria.
ampliconseq
Variant calling pipeline for amplicon sequencing data
Predict_FF
Predict fetal fraction from sequenced DNA extracted from maternal blood
D3b-autoPVS1
This is a modiifed port of the original https://github.com/JiguangPeng/autopvs1, branched from commit `7fb1be97667e5ef576f81bf2fabbddcf9a4c7594`. It was re-worked in order to work with Kids First germline annotation outputs.