LeafLiu's repositories
awesome-cancer-variant-databases
A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
MIT000
cfDNApipe
cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data
Language:PythonNOASSERTION000
grenepipe
A flexible, scalable, and reproducible pipeline to automate variant calling from sequence reads.
Language:PythonGPL-3.0000
IMPACT-Pipeline
Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay
Language:PerlApache-2.0000
MutScan
Detect and visualize target mutations by scanning FastQ files directly
Language:CMIT000
primerDesign
A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants
Language:PythonMIT000
TBtools
GUI/CommandLine Tool Box for biologistists to utilize NGS data.
Language:Shell000
WisecondorX
WisecondorX — An evolved WISECONDOR
Language:PythonNOASSERTION000