replacing the interface of irlbaSVD with CppIrlba `request`
xiangpin opened this issue · comments
Thanks for developing the infrastructure (BiocSingular
and CppIrlba
). They are significant in omics or other data analysis. However,
the runIrlbaSVD
uses the irlba
, which is slow for big data. Since CppIrlba
has implemented the same work with Eigen
, whether it will be applied to BiocSinglular
.
Indeed, we did have plans for that, but the relevant proposal didn't get funded. 😞
So now there's no one to work on it. (Unfortunately, I don't have the time to improve this package; I just try to fix any bugs and keep things running as best as I can.) Back to the grant proposal drawing board, I guess.