Beast code in Giters

Kluger Lab's repositories

FIt-SNE

Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

Language:C++NOASSERTION579 36 75

SpectralNet

Deep network that performs spectral clustering

Language:PythonMIT316 15 27

ALRA

Imputation method for scRNA-seq based on low-rank approximation

Language:RMIT69 7 26

t-SNE-Heatmaps

Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq

Language:R47 9 1

pyFIt-SNE

Python Wrapper for FIt-SNE

Language:C++NOASSERTION45 6 11

DAseq

Language:RMIT37 4 12

GeneTrajectory

R implementation of GeneTrajectory

Language:R33 7 7

deepcytof

Language:PythonApache-2.017 60

oocPCA

Out-of-Core Principal Component Analysis

Language:C++17 5 4

Ritornello

Ritornello is a high fidelity control free ChIP-seq peak calling algorithm

Language:C++GPL-3.012 6 4

GeneTrajectory-python

Python implementation of Gene Trajectory

Language:Jupyter NotebookMIT1000

ALRA-paper

Language:R8 4 1

adversarial-examples

Code to reproduce results in the paper "Defending against Adversarial Images using Basis Functions Transformations"

Language:Python5 5 2

FIt-SNE-paper

Language:R4 30

pcafast

Matlab implementation of a randomized algorithm for principal component analysis

Language:MATLAB4 40

SIMVI

Language:Jupyter NotebookBSD-3-Clause4 30

DAseq-paper

Language:R3 30

rpca-mkl

Implementation of randomized PCA using Intel MKL

Language:C++2 3 3

batchEffectRemoval2020

Language:Python1 40

Scripts_Roulis_et_al_2020

Language:R1 4 1

stg

Language:PythonMIT1 10

BatchEffectRemoval

Language:Python040

GeneTrajectory-paper

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GT

Language:R040

GTF

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IMC-Shoreline

040

LocalMarkerDetector

Language:RMIT000

Pembro-Brain-Met-Trial-Nanostring

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RotationScheduler

Language:R040