JunjuanZheng

alphafold

Open source code for AlphaFold.

mp_duty

抓取网络文章到github issues保存

MultimodalPrognosis

Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction

tinyarray

plots function for array

DeepProg

Deep-Learning framework for multi-omic and survival data integration

learn

my learning journey

SVM-RFE

An R implementation of the (multiple) Support Vector Machine Recursive Feature Elimination (mSVM-RFE) feature ranking algorithm

TCGAWorkflow

TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages

bmtmkl

Bayesian Multitask Multiple Kernel Learning

sCCA

Sparse Canonical Correlation Analysis (sCCA)

pancancer-clustering

Bayesian network modelling of mutational interactions identifies novel cancer subgroups

DeepMOCCA

Graph Neural Network model for survival analysis from multi-omics data

MDS-expression

R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes

UsualRcode

bioinformatics R test code

zhang-lab

The Zhang's lab aims to provide a model or GUI of algorithm for example and further studies. ALL of them are used just for research, but not for commercy. And the web are updating consistently. If you have any questions, do not hesitate to contact us! (E-mail: 843155331@qq.com, Zhenyuan Ning; or yuzhang@smu.edu.cn, Yu Zhang)

test1

Chemosensitivity

Predicting chemosensitivity using gene expression

pancancer_survival_analysis

mg14

mg14's favourite R functions

BCR_TCR_PROCESSING_PIPELINE

BCR/TCR processing pipeline for NGS data

RNAAgeCalc

A multi-tissue transcriptional age calculator

panclassif

A method to improve TCGA pancancer classifiers performance

SuMu

A package for analyzing genetic data for association with phenotypes

BioinformaticsDaily

my daily codes for general use

Pancancer-Metabolic-Gene-Alterations

Metabolic Gene Alterations Across 32 Cancer Types and Their Clinical Significance

metagene_pred

R Codes for metagene pred building

minicurso_mlr3

Aprendizagem de Máquina aplicada à saúde com R e mrl³

ICS_feature_selection

This repository contains the code for Integrative Clustering and Supervised Feature selection algorithm based on R language.

workflow

lichang-wuhan-union-hospital

Meta_PKN

integration of omnipath causal network with STITCH and Recon3D