NICER
NICE Renew (other features such as GAMMA, Multitrans will be updated)
Setup using Docker image
- cat Docker image nicer_centos.tar file should be created after these commands
cd docker/
cat nicer_centos.tar* >> nicer_centos.tar
-
Install Docker
-
Run NICER using Docker
docker load -i nicer_centos.tar
docker run --priviledged -d -p 8080:8080 nicer_centos init
docker exec -it containername
- Check NICER using web
Quick link: http://localhost:8080
Setup using Eclipse(on Linux)
- Basic instructions
sudo chmod -c 777 ./NICER/ -R
sudo yum install ld-linux.so.2
sudo yum install epel-release
- install R language
sudo yum install R
- install R 'qqman' package
R command : install.packages('qqman')
- Using Eclipse
add all apache/lib/*.jar to the project
- Change Directory Settings
at
NICER/NICER/src/main/Setup.java
change
final static String mainDir ="set NICER folder directory here";
For Trouble Shooting
a. When NICE/t_test_static doesn't work!!
use following command to allow execution : sudo chmod -c 777 ./NICE/t_test_static