Ichoran / metrology

Analyze animal-by-animal summary metrics from Choreography-processed output of the Multi-Worm Tracker

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Metrology - Worm Health Monitoring

Metrology is a small utility to extract specific parameters from pre-defined Choreography runs on C. elegans experiments analyzed with the Multi-Worm Tracker.

Specifically, it is designed to extract per-animal scores from a standard behavioral assay consisting of a five minute recording, twelve taps delivered at a ten-second inter-stimulus interval, and a brief cooldown.

As the assay changes, the code itself will be changed, with previous branches typically being archived in a fork.

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Analyze animal-by-animal summary metrics from Choreography-processed output of the Multi-Worm Tracker

License:BSD 3-Clause "New" or "Revised" License


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Language:Rust 100.0%