Ichoran

thyme

Thyme is a microbenchmark utility for Scala. It includes Parsley, a (simple) local profiling tool.

kse

The Kerr Scala Extensions contain core functionality missing from the Scala standard library.

functional-antipattern

Examples of where functional programming, or a particular functional programming idiom, leads one to an antipattern. The goal is to effectively use the strengths of computers to augment our weaknesses.

kse3

Kerr Scala Extensions for Scala 3

scala-java8-streams

scala-collection-laws

An exploration of partially automatic generation of tests for the entire collections library.

choreography

Analysis software for post-capture analysis of _C. elegans_ behavior.

hdf5-image-medley

This repository contains small example programs of how to read and write HDF5 images in a variety of languages.

mwt-core

Core image processing routines for the Multi-Worm Tracker: track hundreds of animals in real time!

annotation_buddy

BOSL

The Belfry OpenScad Library - A library of tools, shapes, and helpers to make OpenScad easier to use.

breeze

Breeze is a numerical processing library for Scala.

collection-strawman

Experimenting with Scala Collections designs for Scala 2.13

dbde-video-cpp

A library for Dynamic Bit Depth Encoded videos in C++ (useful for certain kinds of scientific imaging)

degenerate

Degenerate is an anti-code generator. Write instances and degenerate will find a parent which generates them.

fastparse

Writing Fast Parsers Fast in Scala

metrology

Analyze animal-by-animal summary metrics from Choreography-processed output of the Multi-Worm Tracker

muFFT

A library for computing the Fast Fourier Transform (FFT) in one or two dimensions.

mwt-labview

LabView front end to the Multi-Worm Tracker: track your worms in real time!

mwt-utilities

Utilities to help extract data from the Multi-Worm Tracker's output data, without going through a full analysis as with Choreography.

MWT_R_analysis_Files

pika-mirror

Pika Mirror will back up old files, some of which may themselves be backups, onto new storage unit(s).

scala

The Scala programming language

scala-java8-compat

A Java 8 compatibility kit for Scala.

slip

For Scala Library Improvement Process documents and work

test-github-pages

Just testing GitHub Pages.

ticklish

Ticklish allows Teensy 3-series boards to provide stimulus trains suitable for animal behavior experiments

tracker-commons

Compilation of information and code bases related to open source trackers for c. elegans

Westlake-DV

DV

wishbone

Wishbone is an algorithm to align cells along developmental trajectories with branches