IGS / FADU

Feature Aggregate Depth Utility

IGS/FADU Issues

BAM headers not same as GFF3 IDs Error
Closed 2 years ago
How to compare FADU output with HTSeq Output
Closed 2 years ago4
Allow file.bam.bai as a valid index name
Closed 2 years ago1
ERROR: LoadError: Attempted to find index file for BAM file /home/ofm/Documents/Genomics/Ecoli/FADU_input/c_1.sorted.bam but could not find one
Closed 2 years ago4
Import FADU results into DESeq2 when counts are not integers
Updated 2 years ago3
Issue with bwa mem, samtools compatibility
Updated 2 years ago1
A very long run time
Closed 2 years ago3
ERROR: LoadError: MethodError: no method matching overlapchunks
Closed 2 years ago4
FADU over-counts specific genes
Closed 5 years ago1
count and TPM numbers are NA after multiple EM iterations
Closed 5 years ago1