HajkD

Hajk-Georg Drost's repositories

LTRpred

De novo annotation of young retrotransposons

Language:RGPL-2.043 5 27

Active-maintenance-of-phylotranscriptomic-hourglasses

Reproducible Scripts: Drost et al., 2015 MBE

Language:Perl4 30

ALE

Reproducible Scripts for Cho et al., 2018

4 30

Phylostratigraphy

Tutorial on how to perform phylostratigraphy

3 20

myTAI_App

An Interactive Shiny App to Perform Phylotranscriptomics

Language:R2 30

RIDER

Reproducible Scripts for RIDER Annotation

Language:UnrealScript1 20

seqreadr

Read Genomic File Formats with R

Language:RGPL-3.01 20

comparative

Comparative Transcriptomics with R

Language:R020

covid19

Covid-19: Genomic Data Retrieval and Evolutionary Genomics

010

dNdS_database

A collection of genome wise dN/dS calculations generated with orthologr

Language:R020

expressive

A tool belt for everyday gene expression data analysis

010

Gaubert_et_al_2017

Reproducible Scripts: Gaubert et al., 2017

Language:R020

genedetectr

A Software Framework for Gene Prediction

020

grabseqs

A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA

Language:PythonMIT010

libsequence

libsequence: a C++ class library for evolutionary genetic analysis

Language:C++GPL-2.0020

networkr

Network Inference Framework

MIT020

NGSPipe

Simply Another Next Generation Sequencing Pipeline in R

020

phylr

R interfaces to common phylogeny inference tools

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post-embryo

Reproducible Scripts: Drost et al., 2016 MBE

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roweb

rOpenSci's Website

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rtificial

A Software Framework for Machine Learning and Artificial Intelligence

020

seqalignr

Massive Scale Sequence Searches and Analytics with R

020

winnr

An R package for true winners, e.g. @nand2dave

Language:R020