Gaorui Gong's repositories
SexSNPFinder
Script for sex-linked snps identification in VCF
Genome-annotation-pipeline
Genome annotation
Analyses_Pipelines
Analyses pipelines that I use for my work
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B3
Biodiversity Genomics Academy 2023: Gene prediction with BRAKER3
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Divergence_time_tree
Estimation of species divergence time
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genomics-analysis-pipeline
Some useful bioinformatics pipelines for genomics analysis
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genomics_general
General tools for genomic analyses.
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PSASS-workflow
Snakemake pipeline to automate a standard PSASS workflow
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py37
My Python and R scripts
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Rpadi_OrgDb
Rhopalosiphum padi OrgDb
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syntenyPlotteR
R package to draw syntenic plots in 3 different styles
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tutorials
Tutorials on phylogenetic and phylogenomic inference
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Zoonomia
Scripts used in the analysis of the 241-mammal Zoonomia dataset for the upcoming publication: "Evolutionary constraint and innovation across hundreds of placental mammals"
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