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Dongqing Sun (DongqingSun96)

DongqingSun96

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Dongqing Sun's repositories

TISCH

Tumor Immune Single-cell Hub

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STRIDE

STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using single-cell transcriptomics data.

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SpatialTrans

Workflow for Spatial Transcriptomics

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Cellist

Cell identification in high-resolution Spatial Transcriptomics

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CheatSheet

Cheat Sheet

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DongqingSun96.github.io

:sparkles: Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com

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github-pages-gallery

A zero dollar solution to host your photo/video gallery online using Github pages and Travis CI. No coding necessary.

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MAESTRO

Single-cell Transcriptome and Regulome Analysis Pipeline

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open-data-registry

A registry of publicly available datasets on AWS

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SpaceScanner

Scanner of specific spatial patterns in tissues

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STRIDE_simulation

Simulation of spatial transcriptomics in STRIDE paper

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YeastTRN3D

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