GeCo Team in Politecnico di Milano

PyGMQL

Python Library for data analysis based on GMQL

NMTF-DrugRepositioning

GMQL-WEB

GMQL WEB Interface

BC_Intrinsic_subtyping

brca_subtype

CombSAFE

Combinatorial and Semantic Analysis of Functional Elements

Docker_VariantHunter

GMQL_Package

GMQL Packages and installation

VirusLab-EIT

genereg

Python library for the analysis of gene expression regulation systems of genes of interest in TCGA cancers.

GEO-metadata-translator

GEO-metadata-translator

GMQL-Docker

Dockerizing GMQL

OpenGDC

An open-source Java tool to automatically extract and convert all clinical and genomic data from the Genomic Data Commons to BED, GTF, CSV, and JSON format

RGMQLlib

jar Scala API for RGMQL package

TICA_v2

Enhancement project for TICA, and web application for external users

viruslab

AWS_configuration

Configurations and scripts for AWS

brca_subtyping

Master Thesis in Computer Science and Engineering at Politecnico di Milano

cancer_classification

CKD_advancement_assessment

Supervised machine learning for the assessment of Chronic Kidney Disease advancement

deib-geco.github.io

Docker_ViruClust

ENCODE_imputation_challenge

GMQL-Data-Manager

GMQL-FederatedNS

Nameserver for GMQL-Federated

Metadata-Enricher

RuleBaseGenerator

simsearch-app

An IGB plugin to identify and compare occurrences of (epi)genomics feature patterns in multiple genome browser tracks.

simsearch-quickload

Quickload repository with sample data for testing the SimSearch app.

VirusViz