Colelyman

gozette

A Micropub server written in Go, primarily designed for static sites.

kleuren

Find bubbles in the Colored de Bruijn Graph to reconstruct phylogenetic trees

cole-doom-emacs

My private customizations to Doom Emacs.

org-show

A simple Emacs package to give presentations directly from org-mode.

org-zettelkasten

Another Zettelkasten implementation using the power of Org-mode.

tilde.el

A very tiny emacs config

tome

A pollen based content management system. A cross between a blog, zettle-kasten, and wiki.

bioconda-recipes

Conda recipes for the bioconda channel.

BloomFilterTrie

An alignment-free, reference-free and incremental data structure for colored de Bruijn graph with application to pan-genome indexing.

bug-free-disco

cl-kleuren

Finding bubbles in the Colored de Bruijn Graph.

colelyman-hugo

My personal Hugo website.

CRISPResso2

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

cs501r-final-project

DeblurGAN

Image Deblurring using Generative Adversarial Networks

hugograyscale

A multi-section single page theme intended as a landing page. This is derived from the startbootstrap-grayscale theme.

hyde-colelyman.com

A static site using the excellent hyde generator.

indieweb-lanyon-hugo

Port of poole/lanyon, to spf13/hugo

jinja_partials

Simple reuse of partial HTML page templates in the Jinja template language for Python web frameworks. #pypackage

kcollections-example

last

A bare bones static site generator using make and pandoc.

markdown

Markdown parser written in Racket.

racket-rash

The Reckless Racket Shell

slideshow

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

subtree_example_child

An example of how to use git subtree (this is the subtree).

subtree_example_parent

An example of how to use git subtree.

thenotepad

📓🍎An experimental blog written in Pollen / Racket

tiddlywiki

My attempt at Zettlekasten

yuck

Yuck is a local-search constraint solver with FlatZinc interface