bionode

bionode

Modular and universal bioinformatics

bionode-ncbi

Node.js module for working with the NCBI API (aka e-utils).

bionode-watermill

💧Bionode-Watermill: A (Not Yet Streaming) Workflow Engine

bionode-fasta

Streamable FASTA parser.

bionode-seq

Module for DNA, RNA and protein sequences manipulation

bionode-bwa

A Node.js wrapper for the Burrow-Wheeler Aligner (BWA).

bionode-go

Gene Ontology in Bionode (WIP)

bionode-examples

Bionode usage example files

bionode-sra

Node.js wrapper for SRA Toolkit

fasta-parser

Buffer Stream parser from FASTA to JSON.

bionode-sam

Node.js wrapper for samtools.

bionode-vcf

vcf parser using javascript

biohacker

A nodeschool workshop that gives some usage examples of bionode for bioinformatics

bionode-gff

GFF parser

bionode-obo

Streaming OBO 1.2 Parser

bionode-fastq

Streamable FASTQ parser

bionode.io

Bionode website

bionode-blast

NodeJS API wrapping the NCBI BLAST Common URL API. WIP.

bionode-quickgo

Acess EBI QuickGO REST API with promises and streams.

bionode-watermill-tutorial

This is a tutorial for bionode-watermill

biopkgs

Custom Nix packages not yet available on NixOS/nixpkgs

github-project-public

Make GitHub project board visible to non members

timeline

[project] gantt chart for msl

bioflow

bionode-scripts

Random useful scripts

cocalc-docker

Docker setup for running CoCalc as downloadable software on your own computer

doc.bionode.io

Beautiful static documentation for your API

events

Gather together a group to skill-share, co-work, and create community

GSoC17

GSoC Project: Streaming Workflow Engine

gsoc18