Cedric Midoux's repositories
atlas
ATLAS - Three commands to start analyzing your metagenome data
autoimport
A toolbox to automatically generate @importFrom roxygen tags from R files.
Cartes_Sorts_5E
Des cartes de sorts pour les différentes classes du jeux de rôle 5E
CedricMidoux
Config files for my GitHub profile.
eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
module-5-Methodes-Outils
Méthodes et outils bioinformatiques pour l'analyse des données à haut débit
phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
phyloseq-extended
Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" provided by the platforms Migale and Genotoul
quarto-inrae-extension
Quarto extension for INRAE Templates